Shirasawa, K. and Koilkonda, P. and Aoki, K. and et al, .
(2012)
SIn silico polymorphism analysis for the development of simple sequence repeat
and transposon markers and construction of linkage map in cultivated peanut.
BMC Plant Biology, 12.
29 p..
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Abstract
Peanut (Arachis hypogaea) is an autogamous allotetraploid legume (2n = 4x = 40) that is
widely cultivated as a food and oil crop. More than 6,000 DNA markers have been developed
in Arachis spp., but high-density linkage maps useful for genetics, genomics, and breeding
have not been constructed due to extremely low genetic diversity. Polymorphic marker loci
are useful for the construction of such high-density linkage maps. The present study used in
silico analysis to develop simple sequence repeat-based and transposon-based markers.
| Item Type: |
Article
|
| Additional Information: |
We are grateful to Dr. Bertioli, University of Brasilia, Brazil, for providing information for
SSR markers derived from BAC-end sequences. This work was supported by the foundation
of the Kazusa DNA Research Institute. |
| Uncontrolled Keywords: |
DNA marker, Genetic linkage map, Peanut (Arachis hypogaea), QTL analysis, Ratio of
oleic/linoleic acid (O/L ratio) |
| Author Affiliation: |
Kazusa DNA Research Institute, 2-6-7 Kazusa-Kamatari, Kisarazu, Chiba 292-0818, Japan |
| Subjects: |
Crop Improvement |
| Divisions: |
Groundnut |
| Depositing User: |
Mr Siva Shankar
|
| Date Deposited: |
20 Jun 2012 08:07 |
| Last Modified: |
20 Jun 2012 08:08 |
| Official URL: |
http://dx.doi.org/10.1186/1471-2229-12-80 |
| URI: |
http://eprints.icrisat.ac.in/id/eprint/6127 |
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